Laing, Carlo, and Ioannis Kevrekidis. (2015) 2015. “Equation-Free Analysis of Spike-Timing-Dependent Plasticity”. Biological Cybernetics 109: 701-14. Reference Link
Lee, Seungjoon, Ioannis Kevrekidis, and George Em Karniadakis. (2015) 2015. “Resilient Algorithms for Reconstructing and Simulating Gappy Flow Fields in CFD”. Fluid Dynamics Research 47. Reference Link
Kattis, Assimakis A., Alexander Holiday, Ana-Andreea Stoica, and Ioannis Kevrekidis. (2016) 2016. “Modeling Epidemics on Adaptively Evolving Networks: A Data-Mining Perspective”. Virulence 7: 153-62. Publisher’s Version: Modeling epidemics on adaptively evolving networks: A data-mining perspective. Reference Link
Li, Xingjie, Matthew Williams, Ioannis Kevrekidis, and Govind Menon. (2016) 2016. “Coarse Graining, Dynamic Renormalization and the Kinetic Theory of Shock Clustering”. Nonlinearity 29: 947-61. Publisher’s Version: Coarse graining, dynamic renormalization and the kinetic theory of shock clustering. Reference Link
Laing, Carlo R., Yu Zou, Ben Smith, and Ioannis Kevrekidis. 2012. “Managing Heterogeneity in the Study of Neural Oscillator Dynamics”. Journal of Mathematical Neuroscience 2 (5). doi:10.1186/2190-8567-2-5. Reference Link
Moon, Sung Joon, Katherine Cook, Karthikeyan Rajendran, Ioannis Kevrekidis, Jaime Cisternas, and Carlo R. Laing. 2015. “Coarse-Grained Clustering Dynamics of Heterogeneously Coupled Neurons”. Journal of Mathematical Neuroscience 5 (2): 2. doi:10.1186/2190-8567-5-2. Reference Link
Liu, Ping, Hannah R. Safford, Iain D. Couzin, and Ioannis Kevrekidis. 2014. “Coarse-Grained Variables for Particle-Based Models: Diffusion Maps and Animal Swarming Simulations”. Computational Particle Mechanics 1 (4): 425-40. doi:10.1007/s40571-014-0030-7. Reference Link
Bold, Katherine A., Karthikeyan Rajendran, Balázs Ráth, and Ioannis Kevrekidis. 2014. “An Equation-Free Approach to Coarse-Graining the Dynamics of Networks”. Journal of Computational Dynamics 1 (1): 111-34. doi:10.3934/jcd.2014.1.111. Reference Link
Chiavazzo, Eliodoro, Charles W. Gear, Carmeline J. Dsilva, Neta Rabin, and Ioannis Kevrekidis. 2014. “Reduced Models in Chemical Kinetics via Nonlinear Data-Mining”. Processes 2: 112-40. doi:10.3390/pr2010112. Reference Link
Bavarian, Mona, Ioannis Kevrekidis, Jay B. Benziger, and Masoud Soroush. 2013. “Modeling and Bifurcation Analysis of a Coionic Conducting Solid Oxide Fuel Cell”. INDUSTRIAL & ENGINEERING CHEMISTRY RESEARCH 52 (9): 3165-77. doi:10.1021/ie3009814. Reference Link
FROUZAKIS, CHRISTOS, Raymond Adomaitis, and Ioannis Kevrekidis. 1991. “RESONANCE PHENOMENA IN AN ADAPTIVELY-CONTROLLED SYSTEM”. International Journal of Bifurcation and ChaosInternational Journal of Bifurcation and Chaos 01 (01): 83-106. Referenced from www.worldscientific.com: RESONANCE PHENOMENA IN AN ADAPTIVELY-CONTROLLED SYSTEM. Reference Link
Barkley, Dwight, and Ioannis Kevrekidis. (1994) 1994. “A Dynamical Systems Approach to Spiral Wave Dynamics”. ChaosChaos 4 (3): 453-60. Reference Link
Maroudas, Dimitrios, Miguel Amat, Ioannis Kevrekidis, Derosa, and Cagin. 2011. Coarse Molecular-Dynamics Analysis of Structural Transitions in Solid Materials. Boca Raton: Crc Press-Taylor & Francis Group. Reference Link
Cisternas, Jaime, Thomas Wasylenko, Ioannis Kevrekidis, Descalzi, Clerc, Residori, and Assanto. 2011. Lurching Waves in Thalamic Neuronal Networks. New York: Springer. Reference Link
Al-Mohssen, Husain, Nicolas Hadjiconstantinou, and Ioannis Kevrekidis. 2006. Acceleration Methods for Coarse-Grained Numerical Solution of the Boltzmann Equation. New York: Amer Soc Mechanical Engineers. Reference Link
Ahuja, Sunil, Victor Yakhot, and Ioannis Kevrekidis. (2008) 2008. “Computational Coarse Graining of a Randomly Forced One-Dimensional Burgers Equation”. Physics of Fluids 20 (3): 035111. Reference Link
Chen, Ting, Suzanne D’Addio, Michael Kennedy, Aleksander Swietlow, Ioannis Kevrekidis, Athanassios Panagiotopoulos, and Robert Prud’homme. (2009) 2009. “Protected Peptide Nanoparticles: Experiments and Brownian Dynamics Simulations of the Energetics of Assembly”. Nano Letters 9 (6): 2218-22. Reference Link
Siettos, Constantinos, Ioannis Kevrekidis, and Nikolaos Kazantzis. (2006) 2006. “An Equation-Free Approach to Nonlinear Control: Coarse Feedback Linearization With Pole-Placement”. International Journal of Bifurcation and Chaos 16 (7): 2029-41. Reference Link
Amat, Miguel, Marco Arienti, Vladimir Fonoberov, Ioannis Kevrekidis, and Dimitrios Maroudas. (2008) 2008. “Coarse Molecular-Dynamics Analysis of an Order-to-Disorder Transformation of a Krypton Monolayer on Graphite”. Journal of Chemical Physics 129 (18): 184106. Reference Link
Xue, Yuzhen, Peter Ludovice, Martha Grover, Lilia Nedialkova, Carmeline Dsilva, and Ioannis Kevrekidis. (2013) 2013. “State Reduction in Molecular Simulations”. Computers & Chemical Engineering 51: 102-10. Reference Link
Ferguson, Andrew, Athanassios Panagiotopoulos, Ioannis Kevrekidis, and Pablo Debenedetti. (2011) 2011. “Nonlinear Dimensionality Reduction in Molecular Simulation: The Diffusion Map Approach”. Chemical Physics Letters 509 (1-3): 1-11. Reference Link
Tsoumanis, Andreas, Karthikeyan Rajendran, Constantinos Siettos, Ioannis Kevrekidis, and Simos. 2011. “Coarse-Graining the Dynamics of Network Evolution: The Rise and Fall of a Networked Society”. In Numerical Analysis and Applied Mathematics Icnaam 2011: International Conference on Numerical Analysis and Applied Math. Vol. 1389. Melville: Amer Inst Physics. Reference Link
Makeev, Alexei, Elena Kurkina, and Ioannis Kevrekidis. (2012) 2012. “Kinetic Monte Carlo Simulations of Travelling Pulses and Spiral Waves in the Lattice Lotka-Volterra Model”. Chaos 22 (2): 023141. Reference Link
Zou, Yu, Michail Kavousanakis, Ioannis Kevrekidis, and Rodney Fox. (2010) 2010. “Coarse-Grained Computation for Particle Coagulation and Sintering Processes by Linking Quadrature Method of Moments With Monte-Carlo”. Journal of Computational Physics 229 (14): 5299-5314. Reference Link
Zou, Yu, Paul Torrens, Roger Ghanem, and Ioannis Kevrekidis. 2012. “Accelerating Agent-Based Computation of Complex Urban Systems”. International Journal of Geographical Information Science 26 (10): 1917-37. Reference Link
Givon, Dror, and Ioannis Kevrekidis. 2008. “MULTISCALE INTEGRATION SCHEMES FOR JUMP-DIFFUSION SYSTEMS”. Multiscale Modeling & Simulation 7 (2): 495-516. Reference Link
Gounaris, Chrysanthos, Karthikeyan Rajendran, Ioannis Kevrekidis, and Christodoulos Floudas. (2011) 2011. “Generation of Networks With Prescribed Degree-Dependent Clustering”. Optimization Letters 5 (3): 435-51. Reference Link
Samaey, Giovanni, Wim Vanroose, Dirk Roose, and Ioannis Kevrekidis. 2008. “Newton-Krylov Solvers for the Equation-Free Computation of Coarse Traveling Waves”. Computer Methods in Applied Mechanics and Engineering 197 (43-44): 3480-91. Reference Link
Zagaris, Antonios, Christophe Vandekerckhove, William Gear, Tasso Kaper, and Ioannis Kevrekidis. (2012) 2012. “STABILITY AND STABILIZATION OF THE CONSTRAINED RUNS SCHEMES FOR EQUATION-FREE PROJECTION TO A SLOW MANIFOLD”. Discrete and Continuous Dynamical Systems 32 (8): 2759-2803. Reference Link
Gauthier, Eric, Thomas Hellstern, Ioannis Kevrekidis, and Jay Benziger. (2012) 2012. “Drop Detachment and Motion on Fuel Cell Electrode Materials”. Acs Applied Materials & Interfaces 4 (2): 761-71. Reference Link
Benziger, Jay, Joanne Chia, Erin Kimball, and Ioannis Kevrekidis. 2007. “Reaction Dynamics in a Parallel Flow Channel PEM Fuel Cell”. Journal of the Electrochemical Society 154 (8): B835-B844. Reference Link
Murisic, Nebojsa, Vincent Hakim, Ioannis Kevrekidis, Stanislav Shvartsman, and Basile Audoly. (2015) 2015. “From Discrete to Continuum Models of Three-Dimensional Deformations in Epithelial Sheets”. Biophysical Journal 109 (1): 154-63. Reference Link
Alexander, Francis, Gregory Johnson, Gregory Eyink, and Ioannis Kevrekidis. (2008) 2008. “Equation-Free Implementation of Statistical Moment Closures”. Physical Review E 77 (2): 026701. Reference Link
Dsilva, Carmeline, Bomyi Lim, Hang Lu, Amit Singer, Ioannis Kevrekidis, and Stanislav Shvartsman. (2015) 2015. “Temporal Ordering and Registration of Images in Studies of Developmental Dynamics”. Development 142 (9): 1717-24. Reference Link
Dsilva, Carmeline, Ronen Talmon, Neta Rabin, Ronald Coifman, and Ioannis Kevrekidis. (2013) 2013. “Nonlinear Intrinsic Variables and State Reconstruction in Multiscale Simulations”. Journal of Chemical Physics 139 (18): 184109. Reference Link
Erban, Radek, Thomas Frewen, Xiao Wang, Timothy Elston, Ronald Coifman, Boaz Nadler, and Ioannis Kevrekidis. (2007) 2007. “Variable-Free Exploration of Stochastic Models: A Gene Regulatory Network Example”. Journal of Chemical Physics 126 (15): 155103. Reference Link
Liu, Ping, Giovanni Samaey, William Gear, and Ioannis Kevrekidis. (2015) 2015. “On the Acceleration of Spatially Distributed Agent-Based Computations: A Patch Dynamics Scheme”. Applied Numerical Mathematics 92: 54-69. Reference Link
Kevrekidis, Ioannis, and Giovanni Samaey. 2009. “Equation-Free Multiscale Computation: Algorithms and Applications”. Annual Review of Physical Chemistry 60: 321-44. Reference Link
Spaeth, Justin, Ioannis Kevrekidis, and Athanassios Panagiotopoulos. (2011) 2011. “A Comparison of Implicit- and Explicit-Solvent Simulations of Self-Assembly in Block Copolymer and Solute Systems”. Journal of Chemical Physics 134 (16): 164902. Reference Link
Kavousanakis, Michail, Ping Liu, Andreas Boudouvis, John Lowengrub, and Ioannis Kevrekidis. (2012) 2012. “Efficient Coarse Simulation of a Growing Avascular Tumor”. Physical Review E 85 (3): 031912. Reference Link
Bavarian, Mona, Masoud Soroush, Ioannis Kevrekidis, and Jay Benziger. (2010) 2010. “Mathematical Modeling, Steady-State and Dynamic Behavior, and Control of Fuel Cells: A Review”. Industrial & Engineering Chemistry Research 49 (17): 7922-50. Reference Link
Kuriyedath, Sreekumar, Borislava Kostova, Ioannis Kevrekidis, and Mountziaris. (2010) 2010. “Lattice Monte Carlo Simulation of Semiconductor Nanocrystal Synthesis in Microemulsion Droplets”. Langmuir 26 (13): 11355-62. Reference Link
Xu, Ye, Hubertus Marbach, Ronald Imbihl, Ioannis Kevrekidis, and Manos Mavrikakis. (2007) 2007. “The Effect of Coadsorbed Oxygen on the Adsorption and Diffusion of Potassium on Rh(110): A First-Principles Study”. Journal of Physical Chemistry C 111 (20): 7446-55. Reference Link
Frewen, Thomas, Gerhard Hummer, and Ioannis Kevrekidis. (2009) 2009. “Exploration of Effective Potential Landscapes Using Coarse Reverse Integration”. Journal of Chemical Physics 131 (13): 134104. Reference Link
Kavousanakis, Michail, Carlos Colosqui, Ioannis Kevrekidis, and Athanasios Papathanasiou. 2012. “Mechanisms of Wetting Transitions on Patterned Surfaces: Continuum and Mesoscopic Analysis”. Soft Matter 8 (30): 7928-36. Reference Link
Sonday, Benjamin, Amit Singer, and Ioannis Kevrekidis. (2013) 2013. “Noisy Dynamic Simulations in the Presence of Symmetry: Data Alignment and Model Reduction”. Computers & Mathematics With Applications 65 (10): 1535-57. Reference Link
Marschler, Christian, Jens Starke, Ping Liu, and Ioannis Kevrekidis. (2014) 2014. “Coarse-Grained Particle Model for Pedestrian Flow Using Diffusion Maps”. Physical Review E 89 (1): 013304. Reference Link
Escudero, Carlos, Christian Yates, Jerome Buhl, Iain Couzin, Radek Erban, Ioannis Kevrekidis, and Philip Maini. (2010) 2010. “Ergodic Directional Switching in Mobile Insect Groups”. Physical Review E 82 (1): 011926. Reference Link
Yanao, Tomohiro, Wang Koon, Jerrold Marsden, and Ioannis Kevrekidis. (2007) 2007. “Gyration-Radius Dynamics in Structural Transitions of Atomic Clusters”. Journal of Chemical Physics 126 (12): 124102. Reference Link
Ahuja, Sunil, Ioannis Kevrekidis, and Clarence Rowley. 2006. “Template-Based Stabilization of Relative Equilibria”. In 2006 American Control Conference, Vols 1-12, 1-12:3606-11. New York: Ieee. Reference Link