Dsilva, Carmeline, Bomyi Lim, Hang Lu, Amit Singer, Ioannis Kevrekidis, and Stanislav Shvartsman. (2015) 2015. “Temporal Ordering and Registration of Images in Studies of Developmental Dynamics”. Development 142 (9): 1717-24. Reference Link
Dsilva, Carmeline, Ronen Talmon, Neta Rabin, Ronald Coifman, and Ioannis Kevrekidis. (2013) 2013. “Nonlinear Intrinsic Variables and State Reconstruction in Multiscale Simulations”. Journal of Chemical Physics 139 (18): 184109. Reference Link
Xue, Yuzhen, Peter Ludovice, Martha Grover, Lilia Nedialkova, Carmeline Dsilva, and Ioannis Kevrekidis. (2013) 2013. “State Reduction in Molecular Simulations”. Computers & Chemical Engineering 51: 102-10. Reference Link
Kim, Sang Beom, Carmeline Dsilva, Ioannis Kevrekidis, and Pablo Debenedetti. (2015) 2015. “Systematic Characterization of Protein Folding Pathways Using Diffusion Maps: Application to Trp-Cage Miniprotein”. Journal of Chemical Physics 142 (8): 085101. Reference Link
Lim, Bomyi, Carmeline Dsilva, Thomas Levario, Hang Lu, Trudi Schuepbach, Ioannis Kevrekidis, and Stanislav Shvartsman. (2015) 2015. “Dynamics of Inductive ERK Signaling in the Drosophila Embryo”. Current Biology 25 (13): 1784-90. Reference Link